Andreas-Loibl.de Studium :: Bioinformatik
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Genomikund Bioinformatik

An dieser Stelle findet ihr von mir erstellte Folien, Quellcodes und Projekte für das Modul Genomik und Bioinformatik meines Studiengangs Computational Science an der Uni Regensburg. Selbstverständlich besteht keinerlei Anspruch auf Aktualität, Korrektheit und Vollständigkeit der Veröffentlichungen!

1. Semester

Projekte

Projekt1: Identify languages by text analysis
Projekt2: GC-skew in bacterial genomes
Projekt3: Greedy contig assembly

Übungen

ex11_iterations
ex12_long_division
ex15_reverse_compliment
ex19_consecutive_digits
ex20_walking_the_grid
ex21_loose_change
ex24_which_protein_are_you
ex25_genetic_code_reusage
ex26_web_hunt
ex27_open_reading_frame
ex30_outlier
ex31_walking_the_grid
ex32_calculating_correlations
ex33_ranked_gene_lists
ex38_binary_tree
ex39_walking_trees
ex41_building_hash_tables
ex43_microarray_processing
ex57_runtimes
ex58_viruses_vs_bacteria
ex59_missing_number
ex78_the_random_square
ex79_random_circle
ex80_normal_samples
ex81_GT_sites

2. Semester

Projekte

Projekt1: Microarray analysis and simulation of data
Projekt2: Tumor classification by SVM

Übungen

ex12_explain
ex13_true_or_false
ex14_cdna
ex15_gene_evolution
ex16_ecoli
ex17_dna_repair
ex18_cancer_biology
ex20_one_in_a_million
ex21_coin_tosses
ex22_explain
ex23_true_or_false
ex24_nmr_spectra
ex25_mens_forearms
ex26_explain
ex29_hierarchical_clustering
ex31_explain
ex32_true_or_false
ex33_clustering_with_kmeans
ex34_clustering_with_pam
ex35_more_trees
ex36_flowers
ex37_tickets
ex38_recap
ex52_testing_in_r
ex53_explain
ex54_true_or_false
ex55_one_dimensional_classification
ex58_svm_with_linear_kernel
ex60_lda
ex61_lda_vs_dlda
ex63_pam
ex64_geography
ex67_explain
ex68_gene_set_size
ex70_tree_traversal

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